GeneNet is a package for analyzing gene expression (time series) data with focus on the inference of gene networks. In particular, GeneNet implements the methods of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).
| Version: | 1.2.4 |
| Depends: | R (≥ 2.7.0), corpcor (≥ 1.5.3), longitudinal (≥ 1.1.5), fdrtool (≥ 1.2.5) |
| Suggests: | graph (≥ 1.4.0), Rgraphviz (≥ 1.4.0) |
| Published: | 2009-10-11 |
| Author: | Juliane Schaefer, Rainer Opgen-Rhein, and Korbinian Strimmer. |
| Maintainer: | Korbinian Strimmer <strimmer at uni-leipzig.de> |
| License: | GPL (≥ 3) |
| URL: | http://strimmerlab.org/software/genenet/ |
| In views: | TimeSeries |
| CRAN checks: | GeneNet results |
| Package source: | GeneNet_1.2.4.tar.gz |
| MacOS X binary: | GeneNet_1.2.4.tgz |
| Windows binary: | GeneNet_1.2.4.zip |
| Reference manual: | GeneNet.pdf |
| News/ChangeLog: | NEWS |
| Old sources: | GeneNet archive |
| Reverse depends: | parcor |
| Reverse suggests: | ebdbNet |