CRAN Package Check Results for Package sybilcycleFreeFlux

Last updated on 2019-09-17 22:48:20 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.0.0 9.29 72.38 81.67 NOTE
r-devel-linux-x86_64-debian-gcc 2.0.0 7.22 57.90 65.12 NOTE
r-devel-linux-x86_64-fedora-clang 2.0.0 98.50 NOTE
r-devel-linux-x86_64-fedora-gcc 2.0.0 99.95 NOTE
r-devel-windows-ix86+x86_64 2.0.0 25.00 78.00 103.00 NOTE
r-patched-linux-x86_64 2.0.0 7.13 71.22 78.35 OK
r-patched-solaris-x86 2.0.0 152.50 NOTE
r-release-linux-x86_64 2.0.0 6.98 71.49 78.47 OK
r-release-windows-ix86+x86_64 2.0.0 16.00 110.00 126.00 NOTE
r-release-osx-x86_64 2.0.0 NOTE
r-oldrel-windows-ix86+x86_64 2.0.0 15.00 80.00 95.00 NOTE
r-oldrel-osx-x86_64 2.0.0 ERROR

Check Details

Version: 2.0.0
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'cfFVA1_cnd_det.csv' 'cfFVA1_cnd_res.csv'
     'glpk_llFBA_20190916_0137.lp'
Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.0.0
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     ‘cfFVA1_cnd_det.csv’ ‘cfFVA1_cnd_res.csv’
     ‘glpk_llFBA_20190917_1102.lp’
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.0.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘cplexAPI’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.0.0
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     ‘cfFVA1_cnd_det.csv’ ‘cfFVA1_cnd_res.csv’
     ‘glpk_llFBA_20190914_2310.lp’
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.0.0
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     ‘cfFVA1_cnd_det.csv’ ‘cfFVA1_cnd_res.csv’
     ‘glpk_llFBA_20190916_0410.lp’
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 2.0.0
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘cplexAPI’ ‘glpkAPI’
Flavor: r-oldrel-osx-x86_64

Version: 2.0.0
Check: examples
Result: ERROR
    Running examples in ‘sybilcycleFreeFlux-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: cfFBA
    > ### Title: cycle free flux
    > ### Aliases: cfFBA lrFBA
    > ### Keywords: cycle free flux loopless FBA
    >
    > ### ** Examples
    >
    > ##---- Should be DIRECTLY executable !! ----
    > ##-- ==> Define data, use random,
    > ##-- or do help(data=index) for the standard data sets.
    > data(iAF1260)
    > model=iAF1260
    > fba=optimizeProb(model)
    Loading required package: glpkAPI
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘glpkAPI’
    Error in checkDefaultMethod(solver, method, pType) :
     package ‘glpkAPI’ not found
    Calls: optimizeProb -> optimizeProb -> .local -> sysBiolAlg
    Execution halted
Flavor: r-oldrel-osx-x86_64