CRAN Package Check Results for Maintainer ‘Gilles Kratzer <gilles.kratzer at math.uzh.ch>’

Last updated on 2019-09-20 01:48:10 CEST.

Package ERROR WARN NOTE OK
abn 1 10 1
mcmcabn 1 11
varrank 1 11

Package abn

Current CRAN status: ERROR: 1, NOTE: 10, OK: 1

Version: 2.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'INLA'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-oldrel-osx-x86_64

Version: 2.1
Check: installed package size
Result: NOTE
     installed size is 8.5Mb
     sub-directories of 1Mb or more:
     libs 6.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 2.1
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'INLA', 'Rgraphviz'
Flavor: r-release-osx-x86_64

Version: 2.1
Check: examples
Result: ERROR
    Running examples in ‘abn-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: linkStrength
    > ### Title: A function that returns the strengths of the edge connections in
    > ### a Bayesian Network learned form observational data.
    > ### Aliases: linkStrength link.strength linkstrength
    > ### Keywords: utilities
    >
    > ### ** Examples
    >
    >
    > dist <- list(a="gaussian", b="gaussian", c="gaussian")
    > data.param <- matrix(c(0,1,0, 0,0,1, 0,0,0), nrow = 3L, ncol = 3L, byrow = TRUE)
    >
    > data.param.var <- matrix(0, nrow = 3L, ncol = 3L)
    > diag(data.param.var) <- c(0.1,0.1,0.1)
    >
    > out <- simulateAbn(data.dists = dist,
    + n.chains = 1, n.adapt = 1000, n.thin = 1, n.iter = 100,
    + data.param = data.param, data.param.var = data.param.var)
    Creation of the BUG file: model.bug
    BUG file created
    Compiling model graph
     Resolving undeclared variables
     Allocating nodes
    Graph information:
     Observed stochastic nodes: 0
     Unobserved stochastic nodes: 3
     Total graph size: 15
    
    Initializing model
    
    >
    > linkStrength(data.param, data.df = out, data.dists = dist,
    + method = "ls", discretization.method = "sturges")
    Error in linkStrength(data.param, data.df = out, data.dists = dist, method = "ls", :
     library Rgraphviz is not available!
    Rgraphviz is available as part of the bioconductor project - see http://www.bioconductor.org/install
    Rgraphviz is required is create.graph=TRUE
    Execution halted
Flavor: r-release-osx-x86_64

Package mcmcabn

Current CRAN status: ERROR: 1, OK: 11

Version: 0.2
Check: package dependencies
Result: ERROR
    Package required but not available: ‘gRbase’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Package varrank

Current CRAN status: WARN: 1, OK: 11

Version: 0.2
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘FSelector’
Flavor: r-patched-solaris-x86

Version: 0.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘varrank.Rmd’ using knitr
    Loading required package: randomForest
    randomForest 4.6-14
    Type rfNews() to see new features/changes/bug fixes.
    
    Attaching package: 'randomForest'
    
    The following object is masked from 'package:ranger':
    
     importance
    
    The following object is masked from 'package:ggplot2':
    
     margin
    
    Loading required package: parallel
    Quitting from lines 123-126 (varrank.Rmd)
    Error: processing vignette 'varrank.Rmd' failed with diagnostics:
    there is no package called 'FSelector'
    --- failed re-building ‘varrank.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘varrank.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86