CRAN Package Check Results for Package g3viz

Last updated on 2019-07-16 07:50:46 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.2 4.20 55.23 59.43 OK
r-devel-linux-x86_64-debian-gcc 1.1.2 3.36 41.88 45.24 OK
r-devel-linux-x86_64-fedora-clang 1.1.2 73.80 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.2 74.32 OK
r-devel-windows-ix86+x86_64 1.1.2 20.00 138.00 158.00 NOTE
r-patched-linux-x86_64 1.1.2 4.51 56.45 60.96 OK
r-patched-solaris-x86 1.1.2 83.40 WARN
r-release-linux-x86_64 1.1.2 4.21 55.40 59.61 OK
r-release-windows-ix86+x86_64 1.1.2 11.00 139.00 150.00 NOTE
r-release-osx-x86_64 1.1.2 WARN
r-oldrel-windows-ix86+x86_64 1.1.2 13.00 98.00 111.00 NOTE
r-oldrel-osx-x86_64 1.1.2 WARN

Check Details

Version: 1.1.2
Check: installed package size
Result: NOTE
     installed size is 10.5Mb
     sub-directories of 1Mb or more:
     doc 9.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.1.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘chart_themes.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    g3viz: visualizing gene/genome/gentics data for fun.
    Any questions, please send emails to <g3viz.group@gmail.com>
    Please send questions to cbioportal@googlegroups.com
    Quitting from lines 48-58 (chart_themes.Rmd)
    Error: processing vignette 'chart_themes.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘chart_themes.Rmd’
    
    --- re-building ‘introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    g3viz: visualizing gene/genome/gentics data for fun.
    Any questions, please send emails to <g3viz.group@gmail.com>
    Quitting from lines 103-114 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘introduction.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘chart_themes.Rmd’ ‘introduction.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.1.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘chart_themes.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    g3viz: visualizing gene/genome/gentics data for fun.
    Any questions, please send emails to <g3viz.group@gmail.com>
    Please send questions to cbioportal@googlegroups.com
    Quitting from lines 48-58 (chart_themes.Rmd)
    Error: processing vignette 'chart_themes.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘chart_themes.Rmd’
    
    --- re-building ‘introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    g3viz: visualizing gene/genome/gentics data for fun.
    Any questions, please send emails to <g3viz.group@gmail.com>
    Quitting from lines 103-114 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘introduction.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘chart_themes.Rmd’ ‘introduction.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.1.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    g3viz: visualizing gene/genome/gentics data for fun.
    Any questions, please send emails to <g3viz.group@gmail.com>
    Please send questions to cbioportal@googlegroups.com
    Quitting from lines 48-58 (chart_themes.Rmd)
    Error: processing vignette 'chart_themes.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-oldrel-osx-x86_64