CRAN Package Check Results for Package GMD

Last updated on 2018-07-21 14:47:28 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-release-osx-x86_64 0.3.3 NOTE
r-oldrel-osx-x86_64 0.3.3 NOTE

Check Details

Version: 0.3.3
Check: R code for possible problems
Result: NOTE
    .file_path_as_absolute: no visible global function definition for
     ‘file_test’
    .plot.text: no visible global function definition for ‘par’
    .plot.text: no visible global function definition for ‘plot’
    .plot.text: no visible global function definition for ‘rect’
    .plot.text: no visible global function definition for ‘text’
    bedgraph.to.depth: no visible global function definition for
     ‘read.table’
    ghist: no visible global function definition for ‘hist’
    heatmap.3: no visible global function definition for ‘par’
    heatmap.3: no visible global function definition for ‘flush.console’
    heatmap.3: no visible global function definition for ‘layout’
    heatmap.3: no visible global function definition for ‘image’
    heatmap.3: no visible global function definition for ‘axis’
    heatmap.3: no visible global function definition for ‘text’
    heatmap.3: no visible global function definition for ‘mtext’
    heatmap.3: no visible global function definition for ‘rect’
    heatmap.3: no visible global function definition for ‘abline’
    heatmap.3: no visible global function definition for ‘lines’
    heatmap.3: no visible global function definition for ‘plot’
    heatmap.3: no visible global function definition for ‘title’
    heatmap.3: no visible global function definition for ‘hist’
    legend: no visible global function definition for ‘par’
    legend : rect2: no visible global function definition for ‘rect’
    legend : segments2: no visible global function definition for
     ‘segments’
    legend : points2: no visible global function definition for ‘points’
    legend : text2: no visible global function definition for ‘text’
    legend: no visible global function definition for ‘strwidth’
    legend: no visible global function definition for ‘xinch’
    legend: no visible global function definition for ‘yinch’
    legend: no visible global function definition for ‘strheight’
    plot.elbow: no visible global function definition for ‘par’
    plot.elbow: no visible global function definition for ‘plot’
    plot.elbow: no visible global function definition for ‘abline’
    plot.elbow: no visible global function definition for ‘mtext’
    plot.elbow: no visible global function definition for ‘text’
    plot.elbow: no visible global function definition for ‘title’
    plot.gmdm: no visible global function definition for ‘par’
    plot.gmdm: no visible global function definition for ‘plot’
    plot.gmdm: no visible global function definition for ‘text’
    plot.gmdm: no visible global function definition for ‘rect’
    plot.gmdm: no visible global function definition for ‘mtext’
    plot.mhist: no visible global function definition for ‘plot’
    plot.mhist: no visible global function definition for ‘abline’
    plot.mhist: no visible global function definition for ‘mtext’
    plot.mhist: no visible global function definition for ‘axis’
    plot.mhist: no visible global function definition for ‘rect’
    plot.mhist: no visible global function definition for ‘lines’
    plot.mhist: no visible global function definition for ‘par’
    plot.mhist.summary: no visible global function definition for ‘par’
    ts2df: no visible global function definition for ‘is’
    Undefined global functions or variables:
     abline axis file_test flush.console hist image is layout lines mtext
     par plot points read.table rect segments strheight strwidth text
     title xinch yinch
    Consider adding
     importFrom("graphics", "abline", "axis", "hist", "image", "layout",
     "lines", "mtext", "par", "plot", "points", "rect",
     "segments", "strheight", "strwidth", "text", "title",
     "xinch", "yinch")
     importFrom("methods", "is")
     importFrom("utils", "file_test", "flush.console", "read.table")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.3.3
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    that memeber histograms have the same order of the bins.
    
    Warning in as.mhist(tmp.x) :
     `bins' are not specified; use automatic numbering instead under assumption
    that memeber histograms have the same order of the bins.
    
    Warning in as.mhist(tmp.x) :
     `bins' are not specified; use automatic numbering instead under assumption
    that memeber histograms have the same order of the bins.
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'GMD-data-processing.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `appendix.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    ! Emergency stop.
    <read *>
    
    l.10 ^^M
    
    ! ==> Fatal error occurred, no output PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-oldrel-osx-x86_64