* using log directory 'd:/Rcompile/CRANpkg/local/2.10/BLCOP.Rcheck' * using R version 2.10.0 (2009-10-26) * using session charset: ISO8859-1 * checking for file 'BLCOP/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'BLCOP' version '0.2.2' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'BLCOP' can be installed ... WARNING Found the following significant warnings: Warning: bad markup (extra space?) at runBLCOPTestSuite.Rd:13:18 See 'd:/Rcompile/CRANpkg/local/2.10/BLCOP.Rcheck/00install.out' for details. * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... WARNING prepare_Rd: BLResult-class.Rd:33-35: Dropping empty section \examples prepare_Rd: BLViews-class.Rd:30-32: Dropping empty section \examples prepare_Rd: COPResult-class.Rd:33-35: Dropping empty section \examples checkRd: (5) COPViews-class.Rd:11: Tag \code is invalid in a \code block checkRd: (5) addBLViews.Rd:39: Tag \code is invalid in a \code block prepare_Rd: replacers.Rd:27-29: Dropping empty section \examples prepare_Rd: bad markup (extra space?) at runBLCOPTestSuite.Rd:13:18 * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING S4 class codoc mismatches from documentation object 'BLResult-class': Slots for class 'BLResult' Code: kappa posteriorCovar posteriorMean priorCovar priorMean tau views Docs: confIgnored posteriorCovar posteriorMean priorCovar priorMean tau views * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * checking PDF version of manual ... OK